Research Center for Functions of Fermented Food

Research Achievements

Peer-Reviewed Articles (In English) / Conference Presentation (In English)

Peer-Reviewed Articles (In English)

FY 2024

  • 1)Oyabu M, Ishihara K, Kamei Y and 18 others. Dnmt3a overexpression disrupts skeletal muscle homeostasis, promotes an aging-like phenotype, and reduces metabolic elasticity. iScience, 2025, in press
  • 2)Akira Yamawo, Tomika Hagiwara, Satomi Yoshida, Misuzu Ohno, Riku Nakajima, Yusuke Mori, Tamayo Hayashi, Hiroki Yamagishi, Kaori Shiojiri.「Interspecific variations in interplant communication and ecological characteristics in tree」Ecology and Evolution 15: 1, 2025

FY 2023

  • 1)Tanabe K, Hayashi H, Murakami N, Yoshiyama Y, Shima J, Shoda S. Glazing Affects the Fermentation Process of Sake Brewed in Pottery. Foods 2024, 13(1), 121; Doi:10.3390/foods13010121
  • 2)Iwabuchi K, Shima J, Komatsuzaki N. Preservation Effects of Sourdough Bread Using Lacticaseibacillus Paracasei and Lactiplantibacillus Plantrum Amer. J. Food Sci. Technol. 2023, 11(4), 156-161. Doi: 10.12691/ajfst-11-4-5
  • 3)Tanimura A, Adachi H, Tanabe K, Ogawa J, Shima J. Hannaella oleicumulans sp. nov. and Hannaella higashiohmiensis sp. nov., two novel oleaginous basidiomycetous yeast species. Int J Syst Evol Microbiol. 2023 Sep;73(9). Doi: 10.1099/ijsem.0.006027.
  • 4)Kasuno M, Yamagata Y, Kawada T, Kayano S, Furumoto T. Photoinduced electron transfer from spinach chloroplasts to carbon paste electrodes through an exogenous electron acceptor. Int J Electrochem Sci. 2023 18(9), 100265. Doi: 10.1016/j.ijoes.2023.100265.

FY 2022

  • 1)Tanabe K, Monguchi M, Inoue R, Zamami R, Nakanishi R, Manabe A, Oe K, Komatsuzaki N, Shima J Lentilactobacillus buchneri domination during the fermentation of Japanese traditional fermented fish (funazushi) Food Sci Nutr. 2022.; 10(11):4073-4079. doi: 10.1002/fsn3.3002
    Link:https://onlinelibrary.wiley.com/doi/10.1002/fsn3.3002
  • 2)Erika Asamizu, Satoshi Kitabayashi and Hideaki Iwahori. A rapid method of DNA detection in field soil infested by the beet cyst nematode, Heterodera schachtii. Nematological Research (In press)
  • 3)Richard Karban, Kaori Shiojiri, Junji Takabayashi. Unidirectional trichomes in rice and prickles in Andropogon virginicus protect meristems from herbivory(2022)Entomol Exp Appl. 170:934-940
  • 4)Koichi Tanabe, Natsumi Maeda, Honoka Okumura, Jun Shima. https://Emergence of [GAR+] cells in yeast from sake brewing affects the fermentation properties. 2023 Yeast. doi: 10.1002/yea.3844
    Link:https://onlinelibrary.wiley.com/doi/10.1002/yea.3844

FY 2021

  • 1)Okamoto M, Takahashi-Nakaguchi A, Tejima K, Sasamoto K, Yamaguchi M, Aoyama T, Nagi M, Tanabe K, Miyazaki Y, Nakayama H, Sasakawa C, Kajiwara S, Brown AJP, Teixeira MC, Chibana H. Erg25 Controls Host-Cholesterol Uptake Mediated by Aus1p-Associated Sterol-Rich Membrane Domains in Candida glabrata Front Cell Dev Biol. 2022 Mar 24;10:820675. doi: 10.3389/fcell.2022.820675.
    Link:https://www.frontiersin.org/articles/10.3389/fcell.2022.820675/full
  • 2)Nagi M, Tanabe K, Tanaka K, Ueno K, Nakayama H, Ishikawa J, Abe M, Yamagoe S, Umeyama T, Nakamura S, Sugai M, Hazen KC, Miyazaki Y. Exhibition of antifungal resistance by sterol-auxotrophic strains of Candida glabrata with intact virulence JAC Antimicrob Resist. 2022 Mar 7;4(1):dlac018. doi: 10.1093/jacamr/dlac018 
    Link:https://academic.oup.com/jacamr/article/4/1/dlac018/6543370
  • 3)Niimi M, Niimi K, Tanabe K, Cannon RD, Lamping E. Inhibitor Resistant Mutants Give Important Insights into Candida albicans ABC Transporter Cdr1 Substrate Specificity and Help Elucidate Efflux Pump Inhibition. Antimicrob Agents Chemother. 2021 Nov 15; doi: 10.1128/AAC.01748-21.
    Link:https://journals.asm.org/doi/10.1128/aac.01748-21
  • 4)Lemaire-Chamley M, Koutouan C, Jorly J, Assali J, Yoshida T, Nogueira M, Tohge T, Ferrand C, Peres LEP, Asamizu E, Ezura H, Fraser PD, Hajirezaei MR, Fernie AR, Rothan C. A Chimeric TGA Repressor Slows Down Fruit Maturation and Ripening in Tomato. Plant Cell Physiol. 2022 Jan 25;63(1):120-134. doi: 10.1093/pcp/pcab150.
    Link:https://academic.oup.com/pcp/article/63/1/120/6403382
  • 5)Xiaojuan Zhang, Mika Nomoto, Marta Garcia-León, Naoki Takahashi, Mariko Kato, Kei Yura, Masaaki Umeda, Vicente Rubio, Yasuomi Tada, Tsuyoshi Furumoto, Takashi Aoyama, Tomohiko Tsuge “CFI 25 Subunit of Cleavage Factor I is Important for Maintaining the Diversity of 3′ UTR Lengths in Arabidopsis thaliana (L.) Heynh” Plant Cell Physiol 2022 Jan 7;pcac002. doi: 10.1093/pcp/pcac002.
    Link:https://academic.oup.com/pcp/article/63/3/369/6500779
  • 6)Kaori Shiojiri, Tomika Hagiwara, Akira Yamawo and Jun Shima (Under article submission) Idea paper: Transfer rate analyses contribute to gain insights on wireless and wired communication in plants. Ecological Research

Conference Presentation (In English)

FY 2024

  • 1)Atsuya Sudo, Fumiya Onishi, Anju Sato, Ryoma Watanabe Daisuke Yoshimura and Erika Asamizu “Nematode fauna analysis in green manure-applied field” 2024 Korea-Japan Joint Symposium on Nematology, September 2024, Busan, Korea

FY 2023

  • 1)Kaori Shiojiri, Invited Lecture 「揮発性物質(匂い)を介した植物間コミュニケーション」Japanese San Francisco Bay Area Seminar 2023 Annual Joint Seminar 11/4/2023
  • 2)Kaori Shiojiri, Invited Lecture [Plant Communication by VOCs In Natural Forest and Influence toward Below-Ground] 6th International Symposium for Plant Signaling and Behavior at University of Washington 2023/6/18-22
  • 3)Kaori Shiojiri, Invited Lecture [Plant volatiles mediate biological interactions] 2023/5/25 Ecology and Evolutionally Seminar Series UC Davis.
  • 4)Koichi Tanabe, Masaki Monguchi, Ryoga Inoue, Rio Zamami, Ryo Nakanishi, Ayano Manabe, Kaho Oe, Noriko Komatsuzaki, Jun Shima Lentilactobacillus buchneri become the dominant species during the fermentation of Japanese traditional fermented fish (funazushi) The 13th Asian Food Study Conference (2023 Bangkok) 2023/8/18